Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806326.1_cds_XP_016494285.1_8714
CDS Infomation

[gene=LOC107813518] [db_xref=GeneID:107813518] [protein=probable protein phosphatase 2C 40] [protein_id=XP_016494285.1] [location=complement(join(43462..43589,44159..44423,44678..45775))] [gbkey=CDS]
Sequence

ATGATGGGTGGACAAGCAATAACTGATCCTGGAGCGGAAATCAAAGTAAGTTTTGGATAT
CACTGTAATTCCAACACTGATGATTCTGGCGATGAATCAGATGGTATTGACATGCGTCCT
GGAACTAAACTTCGAAGAGCCAACAGTTCCTTCTCTTGCCTTTCTGGTGCTGCTCTAAGT
GCCAATGCCACACTAGCTAACACAAATATTTGCAACGGATTGCTTGGGGCTGAGATACTG
CCCGCACTGGATTCACCTACTTCATTCCGCAGGATACCCTCTTCTCCATCCTTTTCAAAG
TTGGATTTATTGTCATCGTCTTTTCAGAGTAGTTTGTCAAACTTAAGTTGTAGTCCGTCC
TCTCCAAGTGAGCTAGCTGAAGACAATTCATCTTCAATGAAATCTTCGAGTGAAAGCTTC
TTTAATGCAACAGAAGTTAAAATAGCGGGTGGTGCTGCGGGTGAAGACAGAGTACAGGCT
GTCTGTTCAGAAGAGAACGACTCGCTTTTCTGTGCCATATATGATGGATTTAATGGAAGA
GATGCAGCTGATTTTCTGGCTGGAACATTGTATGAAACAATTAGACATTACCTTAGTTTA
TTGGACTGGGAACTCGAACGAGATTCTAAAGTTAATAAGGGCTCATATGTTGATTGCTTT
GGTAATGCGCTTCCTTATTTAGATGTGGAGAAGCCGTGTACCTCTTTTAAGCAAAAAGTA
CTTAATAGCCTGGAACAGGCTCTTACTCAAGCTGAGAACGATTTCCTTCACATGGTTGAA
CAGGAAATGGATGACCGTCCTGACTTAGTATCGATTGGATCCTGTGTATTAGTTGCGCTT
CTACTTGGGAAGAACTTGTATGTGCTCAATGCAGGAGATAGTCGAGCTGTATTGGCAACT
TGTGGTGAAAGCATCGTTACTAATAGTGATGGACGATTGCAAGCTGTTCAGCTTACTGTT
AGTCATACTGTCGATAATGAATCTGAAAGAATCCAACTATTAAAGAATCATCCTGAAGAT
CACTCAACGATCGTGGGTGGGAAAGTCAAGGGAAAGCTAAAGGTTACTCGGGCACTTGGA
GTTGGTTACTTGAAAAAGAAGAGTATGAATGATGCTTTGATGGGAATTCTTCGCGTCCGA
AATCTAATCAGTCCTCCATATATTTCTGTACAACCGTCTCTGACTGTACATGAAATATCA
AGTTCTGATCATTTTGTTGTACTTGGAAGCGACGGTCTATTTGACTTCTTCAACAATGAT
GAGGTTGTAAAGCTTGTCCATTCTTATATTCAACGTTACCCTTTTGGCGATCCAGCCAAA
TTTCTGCTGGAGCAGCTTGTAATTCGAGCAGCAGATTGTGCAGGATTTAGTAAGGAAGAG
TTGATGAGCATACCAGCTGGGAGGAGGAGGAAATATCACGACGATGTGACAGTAATTGTG
ATAATCCTTGGAATGAACAAACGAACCTCAAAAGCATCGACTCGCCTATGA

Peptide Sequence

PEP ID

XP_016494285.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 40 [Nicotiana tabacum]
Sequence

MMGGQAITDPGAEIKVSFGYHCNSNTDDSGDESDGIDMRPGTKLRRANSSFSCLSGAALS
ANATLANTNICNGLLGAEILPALDSPTSFRRIPSSPSFSKLDLLSSSFQSSLSNLSCSPS
SPSELAEDNSSSMKSSSESFFNATEVKIAGGAAGEDRVQAVCSEENDSLFCAIYDGFNGR
DAADFLAGTLYETIRHYLSLLDWELERDSKVNKGSYVDCFGNALPYLDVEKPCTSFKQKV
LNSLEQALTQAENDFLHMVEQEMDDRPDLVSIGSCVLVALLLGKNLYVLNAGDSRAVLAT
CGESIVTNSDGRLQAVQLTVSHTVDNESERIQLLKNHPEDHSTIVGGKVKGKLKVTRALG
VGYLKKKSMNDALMGILRVRNLISPPYISVQPSLTVHEISSSDHFVVLGSDGLFDFFNND
EVVKLVHSYIQRYPFGDPAKFLLEQLVIRAADCAGFSKEELMSIPAGRRRKYHDDVTVIV
IILGMNKRTSKASTRL

Transcript Sequence

Gene sequence data has not been registered.